pyCrossTalkeR

Getting Started

  • pyCrossTalkeR Human Myelofibrosis Example
  • pyCrossTalkeR Human Myocardial Infarction Example

API Reference

  • API
pyCrossTalkeR
  • Index

Index

A | C | F | G | M | P | R

A

  • add_node_type() (in module pycrosstalker.tools.utils)
  • analise_LR() (in module pycrosstalker.tools.generate_report)

C

  • comparative_med() (in module pycrosstalker.tools.utils)
  • comparative_pagerank() (in module pycrosstalker.tools.utils)
  • create_diff_table() (in module pycrosstalker.tools.Comparative_condition)

F

  • filtered_graphs() (in module pycrosstalker.tools.utils)
  • fisher_test_cci() (in module pycrosstalker.tools.utils)

G

  • gene_annotation() (in module pycrosstalker.plots)

M

  • mannwhitneyu_test_cci() (in module pycrosstalker.tools.utils)
  • module
    • p
    • pycrosstalker.plots
    • pycrosstalker.tools
    • pycrosstalker.tools.lrobject

P

  • p
    • module
  • plot_bar_rankings() (in module pycrosstalker.plots)
  • plot_cci() (in module pycrosstalker.plots)
  • plot_clustermap() (in module pycrosstalker.plots)
  • plot_graph_clustermap() (in module pycrosstalker.plots)
  • plot_pca_LR_comparative() (in module pycrosstalker.plots)
  • plot_sankey() (in module pycrosstalker.plots)
  • pycrosstalker.plots
    • module
  • pycrosstalker.tools
    • module
  • pycrosstalker.tools.lrobject
    • module

R

  • ranking() (in module pycrosstalker.tools.utils)
  • ranking_net() (in module pycrosstalker.tools.utils)
  • read_lr_single_condition() (in module pycrosstalker.tools.Single_Condition)

© Copyright 2025, James Nagai.

Built with Sphinx using a theme provided by Read the Docs.