pycrosstalker.tools.Single_Condition.read_lr_single_condition

pycrosstalker.tools.Single_Condition.read_lr_single_condition(input, sel_columns, out_path='/tmp/', sep=',', colors=None)

This function loads the single conditions LR outputs and use it to generate the report data and it`s object. It assumes that the table presents the following columns Ligand, Ligand.Cluster, Receptor,Receptor.Cluster and MeanLR/another measure

Parameters

input :

Named vector with the lrpaths of each output or an AnnData object

sel_columns :

selected columns

out_path :

Path to deposit the results

sep :

character used to divide the columns on input file

colors :

colorlist

Returns

LRObject